<?xml version="1.0" encoding="UTF-8"?><rss xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:content="http://purl.org/rss/1.0/modules/content/" xmlns:atom="http://www.w3.org/2005/Atom" version="2.0"><channel><title><![CDATA[Topics tagged with bioinformatics]]></title><description><![CDATA[A list of topics that have been tagged with bioinformatics]]></description><link>https://forum.fedi.dk/tags/bioinformatics</link><generator>RSS for Node</generator><lastBuildDate>Mon, 24 Aug 2026 21:38:16 GMT</lastBuildDate><atom:link href="https://forum.fedi.dk/tags/bioinformatics.rss" rel="self" type="application/rss+xml"/><pubDate>Invalid Date</pubDate><ttl>60</ttl><item><title><![CDATA[Yesterday marked 10 years since the publication of our article on how Excel spreadsheets cause autocorrect errors to genomics data.]]></title><description><![CDATA[@mdziemann I remember this paper!]]></description><link>https://forum.fedi.dk/topic/a79bd0d9-631e-4348-970c-c2b167bd8636/yesterday-marked-10-years-since-the-publication-of-our-article-on-how-excel-spreadsheets-cause-autocorrect-errors-to-genomics-data.</link><guid isPermaLink="true">https://forum.fedi.dk/topic/a79bd0d9-631e-4348-970c-c2b167bd8636/yesterday-marked-10-years-since-the-publication-of-our-article-on-how-excel-spreadsheets-cause-autocorrect-errors-to-genomics-data.</guid><dc:creator><![CDATA[epicbear@genomic.social]]></dc:creator><pubDate>Invalid Date</pubDate></item><item><title><![CDATA[Lemna Bio (lemna.bio), an #EPFL spin-off building structural AI models that reason about how molecules interact, directly from 3D structures, is looking for a (paid!) intern to benchmark their newly developed models.]]></title><description><![CDATA[Who we are looking forYou are finishing or have recently finished an MSc in computational biology, bioinformatics, or a related field. What matters most is that you have a good understanding of biological networks, and good computational skills.Required    • Strong Python and the scientific stack (NumPy, pandas)    • Experience handling protein structure data (PDB/mmCIF, AlphaFold DB) and building reproducible data pipelines over thousands of structures    • Working knowledge of network and graph analysis (NetworkX, igraph, clustering and community detection)    • Familiarity with biological interaction and annotation resources (STRING, BioGRID, UniProt, disease gene sets such as OpenTargets or DisGeNET)    • Benchmarking rigor: you understand precision/recall trade-offs, how to build fair negative sets, and how to spot circularity    • Ability to read a published method and reproduce its analysis from paper plus code    • Good scientific writing and communication in EnglishDuration: 6 monthsPaid: CHF 2,200 gross monthly#gefedihired #switzerland #epfl #bioinformatics #StructuralBiology #StructuralBiology]]></description><link>https://forum.fedi.dk/topic/ae9c3a05-6e14-420d-86ed-8aff25c276ae/lemna-bio-lemna.bio-an-epfl-spin-off-building-structural-ai-models-that-reason-about-how-molecules-interact-directly-from-3d-structures-is-looking-for-a-paid-intern-to-benchmark-their-newly-developed-models.</link><guid isPermaLink="true">https://forum.fedi.dk/topic/ae9c3a05-6e14-420d-86ed-8aff25c276ae/lemna-bio-lemna.bio-an-epfl-spin-off-building-structural-ai-models-that-reason-about-how-molecules-interact-directly-from-3d-structures-is-looking-for-a-paid-intern-to-benchmark-their-newly-developed-models.</guid><dc:creator><![CDATA[m_correa_m@fediscience.org]]></dc:creator><pubDate>Invalid Date</pubDate></item></channel></rss>