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  3. I'm trying to find guidelines for writing alt text for chemical structures and the Google Scholar search for "alt text chemical structure" is embarassingly bad.

I'm trying to find guidelines for writing alt text for chemical structures and the Google Scholar search for "alt text chemical structure" is embarassingly bad.

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accessibilitya11y
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  • belehaa@wandering.shopB belehaa@wandering.shop

    @briney I do not know of any existing guidelines, but I do know this problem. Like all alt-text, I think it depends on purpose. "Structure of caffeine" may be sufficient in some circumstances, and not in others

    I have written alt-text for quite a lot of very simple organic structures for use in introductory chemistry classes where the point of the image for sighted students is to recognize the structure or functional group. In those cases I describe the shapes and connectivity

    briney@glammr.usB This user is from outside of this forum
    briney@glammr.usB This user is from outside of this forum
    briney@glammr.us
    wrote sidst redigeret af
    #4

    @belehaa That's really helpful thank you. I appreciate you sharing your practical experience/knowledge.

    There's a fair bit of guidance for math equations, so I've been surprised to not find anything for chemical structures!

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    • briney@glammr.usB briney@glammr.us

      Anyway, if you are aware of guidelines for writing good alt text for chemistry structure images (think organic chemistry with all of the chains and rings), let me know! #accessibility #a11y

      carolski@mas.toC This user is from outside of this forum
      carolski@mas.toC This user is from outside of this forum
      carolski@mas.to
      wrote sidst redigeret af
      #5

      @briney I worked with someone a few years ago as I developed an OER for an introductory Organic class. I had some money to fund the work, but if you don’t he might provide some help to get you started. And the situation may have changed!

      https://hoby.com/

      My book is out there, in various forms, if you want me to point to it just ask.

      briney@glammr.usB carolski@mas.toC 2 Replies Last reply
      0
      • belehaa@wandering.shopB belehaa@wandering.shop

        @briney I do not know of any existing guidelines, but I do know this problem. Like all alt-text, I think it depends on purpose. "Structure of caffeine" may be sufficient in some circumstances, and not in others

        I have written alt-text for quite a lot of very simple organic structures for use in introductory chemistry classes where the point of the image for sighted students is to recognize the structure or functional group. In those cases I describe the shapes and connectivity

        belehaa@wandering.shopB This user is from outside of this forum
        belehaa@wandering.shopB This user is from outside of this forum
        belehaa@wandering.shop
        wrote sidst redigeret af
        #6

        @briney I think that chemical alt-text is an area in need of a lot of work (at *least* for awareness). I've considered proposing a symposium/panel about it for the next Biennial Conference on Chemical Education (unfortunately that's not until 2028!). I don't have much in the way of solutions or answers, but I know that the BCCE folks would be a good group to connect with

        Maybe the folks following #chemsky have some other leads?

        briney@glammr.usB 1 Reply Last reply
        0
        • briney@glammr.usB This user is from outside of this forum
          briney@glammr.usB This user is from outside of this forum
          briney@glammr.us
          wrote sidst redigeret af
          #7

          @bnut Thank you for the feedback. I have a lot of experience with chemistry but zero knowledge of writing alt text for chemistry, so thinking about the relevant attributes is really helpful.

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          • carolski@mas.toC carolski@mas.to

            @briney I worked with someone a few years ago as I developed an OER for an introductory Organic class. I had some money to fund the work, but if you don’t he might provide some help to get you started. And the situation may have changed!

            https://hoby.com/

            My book is out there, in various forms, if you want me to point to it just ask.

            briney@glammr.usB This user is from outside of this forum
            briney@glammr.usB This user is from outside of this forum
            briney@glammr.us
            wrote sidst redigeret af
            #8

            @carolski Thanks for the link. I will be sure to check out his work. And I'm glad you worked with someone to create good alt text! There is sadly a lack of awareness of accessibility issues in a lot of science.

            carolski@mas.toC 1 Reply Last reply
            0
            • carolski@mas.toC carolski@mas.to

              @briney I worked with someone a few years ago as I developed an OER for an introductory Organic class. I had some money to fund the work, but if you don’t he might provide some help to get you started. And the situation may have changed!

              https://hoby.com/

              My book is out there, in various forms, if you want me to point to it just ask.

              carolski@mas.toC This user is from outside of this forum
              carolski@mas.toC This user is from outside of this forum
              carolski@mas.to
              wrote sidst redigeret af
              #9

              @briney here’s my book, the alt text should be in there!
              https://openoregon.pressbooks.pub/introductoryorganic/

              1 Reply Last reply
              0
              • belehaa@wandering.shopB belehaa@wandering.shop

                @briney I think that chemical alt-text is an area in need of a lot of work (at *least* for awareness). I've considered proposing a symposium/panel about it for the next Biennial Conference on Chemical Education (unfortunately that's not until 2028!). I don't have much in the way of solutions or answers, but I know that the BCCE folks would be a good group to connect with

                Maybe the folks following #chemsky have some other leads?

                briney@glammr.usB This user is from outside of this forum
                briney@glammr.usB This user is from outside of this forum
                briney@glammr.us
                wrote sidst redigeret af
                #10

                @belehaa Thanks for the lead. The math community seems to have some established guidance for equations, but I've not found similar resources for chemistry. Hopefully, I can connect with someone working on this issue.

                1 Reply Last reply
                0
                • briney@glammr.usB briney@glammr.us

                  Anyway, if you are aware of guidelines for writing good alt text for chemistry structure images (think organic chemistry with all of the chains and rings), let me know! #accessibility #a11y

                  ardeninred@glammr.usA This user is from outside of this forum
                  ardeninred@glammr.usA This user is from outside of this forum
                  ardeninred@glammr.us
                  wrote sidst redigeret af
                  #11

                  @briney not chemistry specifically, but I have found this guide to be really helpful for writing alt-text (or creating alternative files that are text only) for many different complex image types: http://diagramcenter.org/table-of-contents-2.html

                  briney@glammr.usB 1 Reply Last reply
                  0
                  • briney@glammr.usB briney@glammr.us

                    @carolski Thanks for the link. I will be sure to check out his work. And I'm glad you worked with someone to create good alt text! There is sadly a lack of awareness of accessibility issues in a lot of science.

                    carolski@mas.toC This user is from outside of this forum
                    carolski@mas.toC This user is from outside of this forum
                    carolski@mas.to
                    wrote sidst redigeret af
                    #12

                    @briney It was really fun! And during a very early time in the pandemic, it was something I could do that didn’t require me leaving home. I felt lucky to have the chance to do it.

                    briney@glammr.usB 1 Reply Last reply
                    0
                    • carolski@mas.toC carolski@mas.to

                      @briney It was really fun! And during a very early time in the pandemic, it was something I could do that didn’t require me leaving home. I felt lucky to have the chance to do it.

                      briney@glammr.usB This user is from outside of this forum
                      briney@glammr.usB This user is from outside of this forum
                      briney@glammr.us
                      wrote sidst redigeret af
                      #13

                      @carolski Writing a book is a big project but rewarding!

                      I'm actually writing a book on scientific data sharing and trying to include some accessibility principles in the book, hence the alt text question.

                      1 Reply Last reply
                      0
                      • ardeninred@glammr.usA ardeninred@glammr.us

                        @briney not chemistry specifically, but I have found this guide to be really helpful for writing alt-text (or creating alternative files that are text only) for many different complex image types: http://diagramcenter.org/table-of-contents-2.html

                        briney@glammr.usB This user is from outside of this forum
                        briney@glammr.usB This user is from outside of this forum
                        briney@glammr.us
                        wrote sidst redigeret af
                        #14

                        @ardeninred I love this resource but I'm a bit disappointed that the only chemistry content they describe is the chemical element.

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                        0
                        • briney@glammr.usB briney@glammr.us

                          Anyway, if you are aware of guidelines for writing good alt text for chemistry structure images (think organic chemistry with all of the chains and rings), let me know! #accessibility #a11y

                          quantumdot2@mas.toQ This user is from outside of this forum
                          quantumdot2@mas.toQ This user is from outside of this forum
                          quantumdot2@mas.to
                          wrote sidst redigeret af
                          #15

                          @briney I honestly thought there'd be some good guidelines out there, but I'm coming up with nothing useful from ACS (American Chemical Society) or RSC (Royal Society of Chemistry).

                          Julia Winter's company (Alchemie) is working on some sort of algorithmic alt-text generation. You can read some of the basic ideas here: https://pubs.acs.org/jceda8/article/101/7/2880/156131/The-Lewis-Structure-Explorer-Accessible-by-Design and more https://www.linkedin.com/pulse/accessibility-crisis-organic-chemistry-what-instructors-really-mc47c/ and a commercial product: https://www.alchem.ie/piph

                          ACS has a committee that I would have thought would have guidance (https://www.acs.org/about/governance/committees/chemists-with-disabilities.html) but all I could find was "Complex graphics and some other sections of online material may still require the use of a human reader or sufficiently written alt-text to be fully accessible to individuals with visual disabilities. This is due in part to the fact
                          that no standard requirements for figure creation and alt-text to describe figures are in place for most online publications.”

                          https://www.acs.org/content/dam/acsorg/about/governance/committees/cwd/teaching-chemistry-to-students-with-disabilities-5th-edition.pdf

                          Hey - if you find something good out there, please share! 🙂

                          briney@glammr.usB srlevine@neuromatch.socialS 2 Replies Last reply
                          0
                          • quantumdot2@mas.toQ quantumdot2@mas.to

                            @briney I honestly thought there'd be some good guidelines out there, but I'm coming up with nothing useful from ACS (American Chemical Society) or RSC (Royal Society of Chemistry).

                            Julia Winter's company (Alchemie) is working on some sort of algorithmic alt-text generation. You can read some of the basic ideas here: https://pubs.acs.org/jceda8/article/101/7/2880/156131/The-Lewis-Structure-Explorer-Accessible-by-Design and more https://www.linkedin.com/pulse/accessibility-crisis-organic-chemistry-what-instructors-really-mc47c/ and a commercial product: https://www.alchem.ie/piph

                            ACS has a committee that I would have thought would have guidance (https://www.acs.org/about/governance/committees/chemists-with-disabilities.html) but all I could find was "Complex graphics and some other sections of online material may still require the use of a human reader or sufficiently written alt-text to be fully accessible to individuals with visual disabilities. This is due in part to the fact
                            that no standard requirements for figure creation and alt-text to describe figures are in place for most online publications.”

                            https://www.acs.org/content/dam/acsorg/about/governance/committees/cwd/teaching-chemistry-to-students-with-disabilities-5th-edition.pdf

                            Hey - if you find something good out there, please share! 🙂

                            briney@glammr.usB This user is from outside of this forum
                            briney@glammr.usB This user is from outside of this forum
                            briney@glammr.us
                            wrote sidst redigeret af
                            #16

                            @QuantumDot2 thanks for sharing what you found. I too am suprised that there’s nothing from ASC or RSC. With the new U.S. accessibility rules going into effect next year, I really hope someone is working on this!

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                            0
                            • quantumdot2@mas.toQ quantumdot2@mas.to

                              @briney I honestly thought there'd be some good guidelines out there, but I'm coming up with nothing useful from ACS (American Chemical Society) or RSC (Royal Society of Chemistry).

                              Julia Winter's company (Alchemie) is working on some sort of algorithmic alt-text generation. You can read some of the basic ideas here: https://pubs.acs.org/jceda8/article/101/7/2880/156131/The-Lewis-Structure-Explorer-Accessible-by-Design and more https://www.linkedin.com/pulse/accessibility-crisis-organic-chemistry-what-instructors-really-mc47c/ and a commercial product: https://www.alchem.ie/piph

                              ACS has a committee that I would have thought would have guidance (https://www.acs.org/about/governance/committees/chemists-with-disabilities.html) but all I could find was "Complex graphics and some other sections of online material may still require the use of a human reader or sufficiently written alt-text to be fully accessible to individuals with visual disabilities. This is due in part to the fact
                              that no standard requirements for figure creation and alt-text to describe figures are in place for most online publications.”

                              https://www.acs.org/content/dam/acsorg/about/governance/committees/cwd/teaching-chemistry-to-students-with-disabilities-5th-edition.pdf

                              Hey - if you find something good out there, please share! 🙂

                              srlevine@neuromatch.socialS This user is from outside of this forum
                              srlevine@neuromatch.socialS This user is from outside of this forum
                              srlevine@neuromatch.social
                              wrote sidst redigeret af
                              #17

                              @QuantumDot2 @briney @belehaa @carolski I found a handful of things (including that same ACS not particularly helpful guidance) last time I looked

                              limited help, but maybe something to start with (Lewis structures aren't really on the scale of what you want to describe): https://pubs.acs.org/jceda8/article/101/7/2880/156131/The-Lewis-Structure-Explorer-Accessible-by-Design

                              and this from libretexts for designing coursework: https://commons.libretexts.org/insight/organic-chemistry-accessibility

                              I think there are arguments to be made for InChI keys rather than (or in addition to) SMILES for things that have ambiguous SMILES, but I think libretexts is probably on the right track

                              briney@glammr.usB 1 Reply Last reply
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                              • briney@glammr.usB This user is from outside of this forum
                                briney@glammr.usB This user is from outside of this forum
                                briney@glammr.us
                                wrote sidst redigeret af
                                #18

                                @bnut thank you so much for sharing the resource and your experience. This is really helpful, especially to know these strategies have been used in the classroom.

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                                • srlevine@neuromatch.socialS srlevine@neuromatch.social

                                  @QuantumDot2 @briney @belehaa @carolski I found a handful of things (including that same ACS not particularly helpful guidance) last time I looked

                                  limited help, but maybe something to start with (Lewis structures aren't really on the scale of what you want to describe): https://pubs.acs.org/jceda8/article/101/7/2880/156131/The-Lewis-Structure-Explorer-Accessible-by-Design

                                  and this from libretexts for designing coursework: https://commons.libretexts.org/insight/organic-chemistry-accessibility

                                  I think there are arguments to be made for InChI keys rather than (or in addition to) SMILES for things that have ambiguous SMILES, but I think libretexts is probably on the right track

                                  briney@glammr.usB This user is from outside of this forum
                                  briney@glammr.usB This user is from outside of this forum
                                  briney@glammr.us
                                  wrote sidst redigeret af
                                  #19

                                  @SRLevine @QuantumDot2 @belehaa @carolski oooh thanks. I have a feeling like guidance is going to be scattered across a bunch of different resources like this.

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                                  • briney@glammr.usB briney@glammr.us

                                    I'm trying to find guidelines for writing alt text for chemical structures and the Google Scholar search for "alt text chemical structure" is embarassingly bad. The top 9 results show up because of the text: "alt text is not available for this image," which is just layers of awful. #accessibility #a11y

                                    idlestate@toot.catI This user is from outside of this forum
                                    idlestate@toot.catI This user is from outside of this forum
                                    idlestate@toot.cat
                                    wrote sidst redigeret af
                                    #20

                                    @briney

                                    One thing I get hung up on about this is that a systematic IUPAC name for any structure, in principal, should describe a structure fully.

                                    This is a level of completeness that very few visual depictions of any kind have available, even if only in principle.

                                    But as most of us who've worked with these things understand, that's cold comfort, because it transmutes the problem into one of being able to read and understand those names, which can contain highly nested components, punctuation, Greek letters, italics, and so on.

                                    These are almost certainly very unhelpful when passed through a screen reader, for instance.

                                    There's a reason we use diagrams so much!

                                    1 Reply Last reply
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